Next Generation RNA Sequence Analysis
Seralogix has an established computational pipeline to pre-process RNA next generation sequencing (NGS) read data. Most NGS platforms are supported. The computational flow is shown in top, right figure, which takes in the large volumes of NGS read data files and processes the reads to obtain read counts associated with genes. The computational pipeline is implemented in a tool that supports the numerous computational steps. A variety of open source and custom developed tools are integrated to enable the compulation flow. Bottom, right figure shows a screen shot of the rnaSEQ tool interface.
The Seralogix NGS computational pipeline has been fully automated to support all the processing steps required to produce a complete table of read counts mapped to specific genes. This data is formatted for immediate importation into the Seralogix's Systems Analysis and Modeling computational pipeline.